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Sequencing freeware
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Sequencing

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Added: November 06, 2010 | Visits: 777

Drums++ Drums++ is a programming language I designed for sequencing music through drum machines. Drums++ program uses simple C ideas, for example // and /* */ comments and { } to seperate sections. I tried to make it as simple as possible so even a non-programmer could use it. See the docs section for... Platforms: *nix

License: Freeware Size: 17.41 KB Download (121): Drums++ Download

Added: August 30, 2013 | Visits: 259

BSmapper BSmapper - Sequence mapper for bisulfite sequencing reads for DNA methylation studies. Can handle Sanger and 454 reads for mapping to whole genomes or target regions. Platforms: Mac

License: Freeware Size: 10.24 KB Download (32): BSmapper Download

Released: November 03, 2012  |  Added: November 03, 2012 | Visits: 346

Scheduled Sequencing Graph Generator SSG-Generator (formerly Scheduled Sequencing Graph Generator) is a simple, open-source, academic software written to understand fundamentals of High Level Synthesis of system design. Platforms: Windows, Mac, Linux

License: Freeware Size: 189.11 KB Download (29): Scheduled Sequencing Graph Generator Download

Added: November 05, 2013 | Visits: 203

DNPTrapper DNPTrapper is a shotgun sequencing assembly editor, specifically designed for analysis and finishing of repeated DNA. Platforms: *nix

License: Freeware Size: 839.68 KB Download (16): DNPTrapper Download

Released: April 09, 2014  |  Added: April 09, 2014 | Visits: 118

Hearbuilder Sequencing HearBuilder Sequencing Super Duper Publications Grades K-6 The award-winning, evidence-based software program is now an iPad app! First students go to the sequencing Fun House. Then they use their tokens in the Arcade. Finally they become Sequencing Superstars! HearBuilder Sequencing features... Platforms: iOS

License: Freeware Size: 87.6 MB Download (7): Hearbuilder Sequencing Download

Released: March 20, 2008  |  Added: August 06, 2008 | Visits: 3.036

ExtraPuTTY ExtraPuTTY is a fork of Putty, which : * allow win32 application to send,receive data on Telnet, SSH, RLogin and Raw protocols. * offers TestStand steps to send,receive data on Telnet, SSH, RLogin and Raw protocols. * automatic sequencing of commands. * generate report... Platforms: Windows

License: Freeware Size: 2.17 MB Download (428): ExtraPuTTY Download

Added: August 07, 2008 | Visits: 1.265

Picture Timeclock Some features are: Automatic Clocking in and out sequencing. Employee tips can be collected as an option when employees clock out, this will help the restaurant managers dealing with the IRS. Translations of common messages to employees in their local language. Optional rounding to the nearest... Platforms: Windows

License: Freeware Size: 5.23 KB Download (127): Picture Timeclock Download

Added: July 20, 2010 | Visits: 983

libjdkmidi libjdkmidi is a C++ MIDI Library. This library was originally a collection of utility functions for MIDI written in C back in 1986 for the Atari ST computer. Since then it has evolved into a fairly powerful C++ MIDI Library including: - MIDI parsing - MIDI Show Control message creation and... Platforms: *nix

License: Freeware Size: 450.56 KB Download (105): libjdkmidi Download

Released: November 10, 2012  |  Added: November 10, 2012 | Visits: 237

Celera Genome Browser for Linux The Celera Genome Browser, developed at Celera Genomics as part of Celera's sequencing and annotation of the human genome, and released as open source in 2006. Platforms: Linux

License: Freeware Size: 5.7 MB Download (59): Celera Genome Browser for Linux Download

Released: November 04, 2012  |  Added: November 04, 2012 | Visits: 250

SeqEntropy SeqEntropy was designed as an accessible, easy-to-use and handy assessment instrument of sequence repeats for short read sequencing. Now you can access and make use of this useful tool directly from the Command Line Interface found in your system. Platforms: Windows

License: Freeware Download (63): SeqEntropy Download

Released: June 08, 2012  |  Added: June 08, 2012 | Visits: 332

Integrated Genome Browser The Integrated Genome Browser (IGB, pronounced Ig-Bee) is an interactive, zoomable, scrollable software program you can use to visualize and explore genome-scale data sets, such as tiling array data, next-generation sequencing results, genome annotations, microarray designs, and the sequence... Platforms: Windows

License: Freeware Size: 8.4 MB Download (44): Integrated Genome Browser Download

Released: October 10, 2012  |  Added: October 10, 2012 | Visits: 293

iMethy iMethy is a handy, easy to use genome-wide DNA methylation analysis and visualization application based on next generation sequencing. Firstly, it holds the command-line pipeline to align the bisulfite-treated short read, identify the methylcytosine at CG/CHG/CHH sites, detect the methylation... Platforms: Windows

License: Freeware Download (56): iMethy Download

Released: August 24, 2012  |  Added: August 24, 2012 | Visits: 296

GNomEx GNomEx is Genomic LIMS and Analysis Project Center designed by the Huntsman Cancer Institute for use by microarray and next generation sequencing core facilities and large research laboratories. KWs: Illumina, Affymetrix, Agilent, MAGE, MySQL/Flex... Platforms: Windows

License: Freeware Size: 26.8 MB Download (52): GNomEx Download

Released: September 17, 2012  |  Added: September 17, 2012 | Visits: 283

Celera Genome Browser The Celera Genome Browser, developed at Celera Genomics as part of Celera's sequencing and annotation of the human genome, and released as open source in 2006. Platforms: Linux

License: Freeware Size: 5.7 MB Download (55): Celera Genome Browser Download

Released: September 20, 2012  |  Added: September 20, 2012 | Visits: 302

USeq USeq is a collection of software tools for for both low and high level analysis of next generation, ultra high throughput signature sequencing data from the Solexa, SOLiD, and 454 platforms. Initial emphasis: chIP-seq and RNA-Seq with FDR estimations. USeq is under continuous development at... Platforms: Windows

License: Freeware Size: 7.6 MB Download (48): USeq Download

Released: June 08, 2012  |  Added: June 08, 2012 | Visits: 242

VarScan The advent of massively parallel sequencing technologies has fundamentally changed the study of genetics. New platforms like the Illumina GAIIx and the Roche GS yield unprecedented levels of sequencing throughput. The analysis and interpretation of data from next-generation sequencing platforms... Platforms: Windows

License: Freeware Download (41): VarScan Download

Released: July 06, 2012  |  Added: July 06, 2012 | Visits: 218

CoNIFER CoNIFER, also knows as Copy Number Inference From Exome Reads is a Python-based tool that uses exome sequencing data to find copy number variants (CNVs) and genotype the copy-number of duplicated genes. As exome capture reactions are subject to strong and systematic capture biases between sample... Platforms: Windows

License: Freeware Download (44): CoNIFER Download

Released: June 24, 2012  |  Added: June 24, 2012 | Visits: 302

ncRNA Mapper ncRNA Mapper is a computer program that gives more insight in the localization of sequencing fragments. Given that sequencing of RNA gives reads at fixed base-positions, ncRNA Mapper analyzes the alignments (generated by Short Sequence Location Mapper; SSLM) by: visualizing them, retrieving the... Platforms: Windows

License: Freeware Download (50): ncRNA Mapper Download

Released: June 10, 2012  |  Added: June 10, 2012 | Visits: 322

TB antibiotic resistance mapper TB antibiotic resistance mapper was developed as a specialized tool that can help you map sequencing reads with the MTB reference genome (H37Rv) using NCBI blast, in order to find out mutation sites. Now you can quickly discover mutations with the help of this instrument. Platforms: Windows

License: Freeware Download (41): TB antibiotic resistance mapper Download

Released: October 24, 2012  |  Added: October 24, 2012 | Visits: 200

SimpleSynth for Mac OS A small and fast synth, perfect for when you just want to play without the hassle of firing up and configuring your favourite sequencing software. It's got a complete general MIDI instrument set built in, and it can load Soundfonts and DLS files. - It doesn't crash loading Soundfonts on... Platforms: Mac

License: Freeware Size: 71.68 KB Download (179): SimpleSynth for Mac OS Download

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